Information for 20-CTGTCTGCCGCAG (Motif 32)

A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C T G A C T G A G T C C T G A A C T G G T C A A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 25.8bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGTCTGCCGCAG
CTGTCTGG-----
 A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGCCGCAG
VBSYGTCTGG-----
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGTCTGCCGCAG
CTGTCTGTCACCT
 A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTCTGCCGCAG
-TGTCTGDCACCT
 A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGTCTGCCGCAG
TWGTCTGV-----
 A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGCCGCAG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGCCGCAG---
TTATCTGNNNNCNNCAGCNG
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTGTCTGCCGCAG---
-----AGCCTCAGGCA
 A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGCCGCAG
SCTGTCARCACC--
 A C G T A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTGCCGCAG
GCTGTG--------
 A C G T A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A G T C A C T G A G T C C G T A A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T