Information for 16-AGAACTTCBCAVTGTG (Motif 30)

C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
Reverse Opposite:
G T A C C G T A A G T C C G T A A G T C A C G T A C T G T A G C C T A G C G T A C T G A C T A G A C G T A C G T A G T C C G A T
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.777
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 12.9bp
Average Position of motif in Background41.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAACTTCBCAVTGTG
TGGACTTTGNNCTNTG
 C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGAACTTCBCAVTGTG
TGGACTTTGNNCTCN-
 C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AGAACTTCBCAVTGTG
ACTCCAAGTACTTGGAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.49
Offset:-7
Orientation:forward strand
Alignment:-------AGAACTTCBCAVTGTG
TATCATTAGAACGCT--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:5
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------AGAACTTCBCAVTGTG
NATTTAAGTACTTANNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGAACTTCBCAVTGTG
GGAAATTCCC------
 C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGAACTTCBCAVTGTG
AACAATGTGCAGTGTT
 C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AGAACTTCBCAVTGTG
---ACTTCCTBGT---
 C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
A C G T A C G T A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T A C G T A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-AGAACTTCBCAVTGTG
NACATCTTN--------
 A C G T C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----AGAACTTCBCAVTGTG
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C A G C T C G A T G A T C A T C G A G T C G T C A T A C G C G A T A C T G A C G T A C T G
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G