Information for 8-TTAATCTCAMGAAACA (Motif 11)

G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G A T C G A T T G A C C A T G A C G T C T A G C G T A A C T G C G T A A C G T A C G T C G T A C T G A
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.771
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.3 +/- 29.7bp
Average Position of motif in Background45.3 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAATCTCAMGAAACA
YTAATCCY--------
 G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAATCTCAMGAAACA
TTAATCCT--------
 G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTAATCTCAMGAAACA
TTAATCCC--------
 G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAATCTCAMGAAACA
NYTAATCCYB-------
 A C G T G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAATCTCAMGAAACA
CTTAATCCC--------
 A C G T G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTAATCTCAMGAAACA
NTTGTTAATCCCTCTNN---
 A C G T A C G T A C G T A C G T G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTAATCTCAMGAAACA
ATAGTTAATCCCCCTCA---
 A C G T A C G T A C G T A C G T G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTAATCTCAMGAAACA
ATAGTTAATCCCCCNNA---
 A C G T A C G T A C G T A C G T G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAATCTCAMGAAACA
CCTAATCCGC-------
 A C G T G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTAATCTCAMGAAACA
TTAATCCG--------
 G A C T A C G T G T C A C G T A A C G T A G T C C G A T A G T C T G C A G T A C A C T G G C T A G C T A C G T A G T A C C G T A
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T