Information for 6-CSTCWCCTMTWTA (Motif 8)

A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G C G A T A C T G C G T A A T C G A C T G
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.6 +/- 19.3bp
Average Position of motif in Background55.8 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CSTCWCCTMTWTA--
NTCNTCCCCTATNNGNN
 A C G T A C G T A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CSTCWCCTMTWTA--
-TTGACCTANTTATN
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CSTCWCCTMTWTA
--TGACCTARTT-
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CSTCWCCTMTWTA
NNGGCGACACCTCNNN-
 A C G T A C G T A C G T A C G T A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CSTCWCCTMTWTA
CCTCACCTG----
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CSTCWCCTMTWTA
--TGACCTTGAT-
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CSTCWCCTMTWTA-----
-NNNACCTCATTATCNTN
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CSTCWCCTMTWTA-----
-GCAACCTCATTATNNNN
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CSTCWCCTMTWTA--
----TCCTGTTTACA
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CSTCWCCTMTWTA-
----AGCTCATTAT
 A G T C A T G C A C G T G T A C C G T A A G T C A G T C A C G T G T C A C G A T C G A T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T