Information for 9-GATAGCAGCA (Motif 6)

A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A
Reverse Opposite:
C G A T A C T G G T A C C G A T C T A G G A T C A C G T G T C A A C G T A G T C
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.848
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif76.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets51.0 +/- 21.7bp
Average Position of motif in Background47.3 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GATAGCAGCA---
ADGGYAGYAGCATCT
 A C G T A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GATAGCAGCA-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATAGCAGCA
AGATAASR---
 A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATAGCAGCA
AGATAAGA---
 A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------GATAGCAGCA---
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0125.1_Gata3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GATAGCAGCA------
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATAGCAGCA
AGGGTAACAGC-
 A C G T A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T

PH0014.1_Cphx/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATAGCAGCA--
ATGATCGAATCAAA
 A C G T A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A A C G T A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATAGCAGCA-
-ATTGCATCAK
 A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GATAGCAGCA---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C T G C G T A C A G T C G T A C T A G A G T C C G T A A C T G T G A C G C T A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A