Information for 22-CACCCGCTTCTGA (Motif 34)

A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A
Reverse Opposite:
A G C T T A G C G C T A A T C G T G C A C T G A A T C G A T G C C A T G C T A G A C T G C G A T A T C G
p-value:1e-6
log p-value:-1.386e+01
Information Content per bp:1.663
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif247.3
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets37.0 +/- 24.6bp
Average Position of motif in Background49.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CACCCGCTTCTGA
-----GCTTCC--
 A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACCCGCTTCTGA-----
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACCCGCTTCTGA-
--CCCCCTGCTGTG
 A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACCCGCTTCTGA
SNGCACCTGCHS----
 A C G T A C G T A C G T A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CACCCGCTTCTGA
----ANCAGCTG-
 A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CACCCGCTTCTGA-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACCCGCTTCTGA--
GACCCCCCGCTGCGC
 A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACCCGCTTCTGA-
GACCCCCCGCTGTG
 A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CACCCGCTTCTGA----
-------TGCTGACTCA
 A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CACCCGCTTCTGA---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A T G C G C T A T A G C G A T C G T A C T A C G A T G C A G C T A C G T A T G C C A G T A C T G T C G A A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A