Information for 14-TMTCACAGGGTGGAAA (Motif 19)

A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A
Reverse Opposite:
A G C T A C G T C A G T A G T C A G T C G C T A G T A C A G T C G A T C A C G T A T C G A C G T A T C G C T G A A C G T C G T A
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.690
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets44.4 +/- 26.9bp
Average Position of motif in Background50.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TMTCACAGGGTGGAAA
---CACAGN-------
 A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TMTCACAGGGTGGAAA-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TMTCACAGGGTGGAAA
-TTGACAGC-------
 A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TMTCACAGGGTGGAAA--
--------AATGGAAAAT
 A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TMTCACAGGGTGGAAA
ACATCAAAGG-------
 A C G T A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:TMTCACAGGGTGGAAA-
----------TGGAAAA
 A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TMTCACAGGGTGGAAA
GAGCACAGCAGGACA-
 A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TMTCACAGGGTGGAAA--
--------NATGGAAAAN
 A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TMTCACAGGGTGGAAA
ACATCAAAGGNA-----
 A C G T A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TMTCACAGGGTGGAAA
AGGTCACGGAGAGGTCA
 A C G T A C G T G T C A A G C T A T G C C G T A A T G C C G T A C T A G T A C G A C T G C G A T C T A G C T A G G C T A C G T A C T G A
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A