Information for 12-GTCATTCCATCTTTGC (Motif 17)

A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
Reverse Opposite:
C T A G A G T C G C T A T C G A C G T A A C T G T C G A A G C T C A T G A T C G T C G A C G T A A C G T A C T G C G T A T A G C
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.686
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.4 +/- 17.2bp
Average Position of motif in Background55.9 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCATTCCATCTTTGC
GTCATN----------
 A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCATTCCATCTTTGC
AGTCACGC---------
 A C G T A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCATTCCATCTTTGC
ATCACCCCAT------
 A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCATTCCATCTTTGC
ATCACCCCAT------
 A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTCATTCCATCTTTGC
NTGTCAN-----------
 A C G T A C G T A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCATTCCATCTTTGC
ATCACCCCAC------
 A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCATTCCATCTTTGC
CNGTCACGCCAC------
 A C G T A C G T A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTCATTCCATCTTTGC
ACGTCATC----------
 A C G T A C G T A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTCATTCCATCTTTGC
NCTGTCAATCAN-------
 A C G T A C G T A C G T A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTCATTCCATCTTTGC
SCTGTCAVTCAV-------
 A C G T A C G T A C G T A T C G C G A T A G T C C G T A A C G T A C G T A T G C G T A C C T G A A C G T T G A C C G A T A C G T C A G T C T A G A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T