Information for 8-YMWCAMCCMASAGKKA (Motif 11)

A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T T G C A T G A C A G T C A C G T A T C G A C G T A C G T A C T G A C T G A C T G A C G T A C T G C G A T A C T G C T G A
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 25.3bp
Average Position of motif in Background67.4 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YMWCAMCCMASAGKKA
-ATCACCCCAC-----
 A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YMWCAMCCMASAGKKA
-ATCACCCCAT-----
 A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:YMWCAMCCMASAGKKA
-ATCACCCCAT-----
 A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YMWCAMCCMASAGKKA
GCCACACCCA-------
 A C G T A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YMWCAMCCMASAGKKA
GGCCACACCCA-------
 A C G T A C G T A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--YMWCAMCCMASAGKKA
GGCCACACCCAN------
 A C G T A C G T A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--YMWCAMCCMASAGKKA---
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-YMWCAMCCMASAGKKA
CNGTCACGCCAC-----
 A C G T A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-YMWCAMCCMASAGKKA
GCCCCACCCA-------
 A C G T A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T/MA0009.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:YMWCAMCCMASAGKKA
TCACACCTAGGTGTGA
 A G C T G T A C C G T A A G T C C G T A G T A C A G T C A G T C G T C A C G T A A T G C C G T A A C T G A C T G A C G T C G T A
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A