Information for 6-GTAGGCTTGCTAA (Motif 6)

T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A
Reverse Opposite:
A G C T A G C T C G T A A C T G A G T C G T C A C G T A A C T G G T A C A G T C A C G T G T C A A G T C
p-value:1e-12
log p-value:-2.763e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 29.9bp
Average Position of motif in Background41.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTAGGCTTGCTAA
-TWGTCTGV----
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTAGGCTTGCTAA
--AAGCTTG----
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTAGGCTTGCTAA
---GGCGCGCT--
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTAGGCTTGCTAA
--AGGCCTNG---
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGCTTGCTAA--------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTAGGCTTGCTAA
CTAGGCCT-----
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTAGGCTTGCTAA----
--NNCGTTGCTATGGNN
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GTAGGCTTGCTAA
---NGCTN-----
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTAGGCTTGCTAA----
--NCCGTTGCTANGNGN
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTAGGCTTGCTAA----
GAAAACTAGTTAACATC
 T A C G A C G T C G T A A C T G A C T G A G T C A C G T A C G T C T A G A G T C A C G T C T G A C T G A A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C