Information for 4-AAAAGGACAACAG (Motif 5)

C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
Reverse Opposite:
A T G C C A G T A T C G C G A T A C G T C T A G A C G T G A T C A G T C C G A T A C G T C G A T A G C T
p-value:1e-12
log p-value:-2.882e+01
Information Content per bp:1.774
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif67.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets40.8 +/- 21.8bp
Average Position of motif in Background52.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGACAACAG
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGACAACAG
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGGACAACAG
ANGNAAAGGTCA----
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAAGGACAACAG
CAAAGGTCAAGGG
 C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGACAACAG
GAAAAAATTGCAAGG-
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAAGGACAACAG----
-AAAGGTCAAAAGGTCA
 C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAAGGACAACAG--
CAAACAACAACACCT
 C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAAAGGACAACAG
AAGGTCAAAAGGTCAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAAGGACAACAG
-CAAGGHCANV--
 C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAAGGACAACAG
--AAGGTCAC---
 C T G A C G T A C G T A C G T A T C A G C T A G T C G A G A T C C G T A C G T A A T G C G C T A A T C G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T