Information for 8-CTGTGAAGTGGAGACA (Motif 20)

G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G A T A G T C A G T C C G T A T A G C C G A T C G A T A G T C C G T A A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 11.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0158.1_Rfx3_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAAGTGGAGACA------
ACTGACCCTTGGTTACCACAAAG
 A C G T G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGTGAAGTGGAGACA-
CNGCTGNNGNNNNCAGATAA
 A C G T A C G T A C G T G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A A C G T
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTGAAGTGGAGACA
-TGTGGATTNNN----
 G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGTGAAGTGGAGACA--
------GGTGYTGACAGS
 G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAAGTGGAGACA
NNTGTGGATTSS-----
 A C G T G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAGTGGAGACA
CCTTTGAWGT-------
 A C G T G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGTGAAGTGGAGACA--
CTGNNNNNNNCAGATAAG
 G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGTGAAGTGGAGACA----
---CTACTTGGATACGGAAT
 G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAGTGGAGACA
CCTTTGATGT-------
 A C G T G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGAAGTGGAGACA
NANTTTCAAGTGGTTAN-
 A C G T A C G T G T A C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G C G T A A G T C C G T A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T