Information for 2-NRTGASTCAH (Motif 2)

C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T
Reverse Opposite:
C T G A C G A T A C T G C G T A T A G C G C A T T G A C G T C A A G C T G C T A
p-value:1e-39
log p-value:-8.986e+01
Information Content per bp:1.504
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif15.15%
Number of Background Sequences with motif1536.2
Percentage of Background Sequences with motif3.25%
Average Position of motif in Targets51.2 +/- 25.5bp
Average Position of motif in Background49.4 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:1
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-NRTGASTCAH-
NNATGASTCATH
 A C G T C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T A C G T
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-NRTGASTCAH-
NNVTGASTCATN
 A C G T C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T A C G T
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:NRTGASTCAH
DATGASTCAT
 C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:4
Score:0.98
Offset:0
Orientation:forward strand
Alignment:NRTGASTCAH
RATGASTCAT
 C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:5
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-NRTGASTCAH-
NDATGASTCATH
 A C G T C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-NRTGASTCAH-
NNATGAGTCATN
 A C G T C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NRTGASTCAH
GATGAGTCAT
 C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NRTGASTCAH-
TGTGACTCATT
 C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NRTGASTCAH--
-ATGAGTCATCN
 C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T A C G T A C G T
A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:10
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:NRTGASTCAH--
GATGAGTCATCC
 C G A T T C G A C A G T A C T G C G T A A T C G G C A T T G A C G C T A G A C T A C G T A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C