Information for 7-WWSWGGTCAGTCAWYC (Motif 19)

C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
Reverse Opposite:
A C T G T C G A C G A T C G A T C T A G C G T A A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G T A C G A T
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.834
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 26.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:WWSWGGTCAGTCAWYC
-TRAGGTCA-------
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:WWSWGGTCAGTCAWYC
--SCTGTCAVTCAV--
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:WWSWGGTCAGTCAWYC
-AGRGGTCA-------
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:WWSWGGTCAGTCAWYC
---AGGTCA-------
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-WWSWGGTCAGTCAWYC
AWWNTGCTGAGTCAT--
 A C G T C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
C G T A C G T A C G T A G C A T G C A T T A C G G T A C G A C T A C T G C G T A A T C G A C G T G T A C C G T A A G C T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:WWSWGGTCAGTCAWYC-
--NTGCTGAGTCATCCN
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C A C G T
A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

MAF::NFE2/MA0501.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WWSWGGTCAGTCAWYC
AAANTGCTGAGTCAT--
 A C G T C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
C T G A C G T A G C T A G A C T G A C T T A C G G T A C G C A T C A T G G C T A T A C G A C G T G T A C C G T A A G C T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:WWSWGGTCAGTCAWYC
--NCTGTCAATCAN--
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WWSWGGTCAGTCAWYC
---TGCTGAGTCATC-
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
A C G T A C G T A C G T G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:WWSWGGTCAGTCAWYC
----GATGAGTCATCC
 C G T A C G A T A T C G C G A T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G C T A G T C
A C G T A C G T A C G T A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C