Information for 13-CCCTGGTTATGAK (Motif 16)

A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
Reverse Opposite:
G T A C A G C T A G T C G T C A G C A T C T G A G T C A A G T C A G T C C G T A T C A G C A T G T C A G
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.726
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif51.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets64.5 +/- 16.8bp
Average Position of motif in Background53.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGTTATGAK
GCTGTGGTTT----
 A C G T A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTGGTTATGAK
-ACTAGTTAAC--
 A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCTGGTTATGAK
CTGTGGTTTN---
 A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGTTATGAK
NNTGTGGTTT----
 A C G T A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCTGGTTATGAK--
GTNTTGTTGTGANNT
 A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGTTATGAK
TGATTGGCTANN--
 A C G T A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGTTATGAK
TACCCTAGTTACCGA
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGTTATGAK
GTCTGTGGTTT----
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGTTATGAK
NNHTGTGGTTWN---
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGTTATGAK-
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A C T G A C G T A G C T C G T A A C G T A C T G C T G A A C T G A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C