Information for 12-CTSAGTGACACAK (Motif 15)

A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
Reverse Opposite:
G T C A A G C T A C T G A C G T A C T G C G A T A G T C C G T A A G T C A C G T A T C G C G T A A C T G
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 28.2bp
Average Position of motif in Background64.8 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTSAGTGACACAK
BTGABTGACAGS-
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTSAGTGACACAK
NTGATTGACAGN-
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTSAGTGACACAK-
---GGTGACTCATG
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTSAGTGACACAK
-----TGACTCA-
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTSAGTGACACAK-
---GGTGACTCATC
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTSAGTGACACAK
--GGATGACTCAT
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTSAGTGACACAK
-TGAGTGACAGSC
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTSAGTGACACAK
--NCGTGACN---
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTSAGTGACACAK
--GGATGACTCAT
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T
A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTSAGTGACACAK-
----ATGACTCATC
 A G T C C G A T A T G C C G T A A C T G A C G T A C T G C G T A A G T C C G T A A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C