Information for 10-AAATGTTAGTTAA (Motif 13)

C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T C G A T C G T A C G T A A G T C A C G T C T G A C G T A A G T C C G T A A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 32.1bp
Average Position of motif in Background71.4 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AAATGTTAGTTAA------
--NTTTTAGTTAACNNAGN
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAATGTTAGTTAA-----
-ANNNCTAGTTAACNGNN
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAATGTTAGTTAA------
--NNNTTAGTTAACTNANN
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AAATGTTAGTTAA-
----ACTAGTTAAC
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0128.1_Otp/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAATGTTAGTTAA-----
-CNNATTAATTAATTNNN
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAATGTTAGTTAA----
AGTTTTTAATTAATTTG
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAATGTTAGTTAA----
GAAAACTAGTTAACATC
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0153.1_Prop1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAATGTTAGTTAA----
GNNTNTTAATTAATNCN
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PH0136.1_Phox2b/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAATGTTAGTTAA-----
-CNNNTTAATTAATTNNN
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0091.1_Lhx1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAATGTTAGTTAA----
NNTTATTAATTAATNCN
 C G T A G T C A C G T A A C G T A C T G A C G T G A C T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G