Information for 9-TKWATCYCCRCAC (Motif 9)

A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T C T A G A G C T A C T G A C T G C T G A A C T G C G T A A C G T C G A T G T C A C G T A
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.4 +/- 9.5bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TKWATCYCCRCAC
NNNAATTAATCCCCNCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TKWATCYCCRCAC
NANANTTAATCCCNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A A C G T

PH0121.1_Obox1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TKWATCYCCRCAC
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TKWATCYCCRCAC
GANNATTAATCCCTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TKWATCYCCRCAC
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TKWATCYCCRCAC
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TKWATCYCCRCAC
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TKWATCYCCRCAC
GNNNATTAATCCCTNCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TKWATCYCCRCAC
---ATCACCCCAC
 A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TKWATCYCCRCAC----
-CTATCCCCGCCCTATT
 A C G T A C G T G C T A G T C A A C G T A G T C A G C T A G T C A G T C T C G A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T