Information for 6-CGTGTGGTTT (Motif 13)

A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A G T C A A G T C A G T C G T C A A G T C T C G A G A T C T A C G
p-value:1e-9
log p-value:-2.111e+01
Information Content per bp:1.848
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif69.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets44.9 +/- 26.6bp
Average Position of motif in Background56.2 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CGTGTGGTTT
NNTGTGGTTT
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CGTGTGGTTT-
-CTGTGGTTTN
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTGGTTT-
NNHTGTGGTTWN
 A C G T A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CGTGTGGTTT
GTCTGTGGTTT
 A C G T A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CGTGTGGTTT
GCTGTGGTTT
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGTGTGGTTT
-TTGCGGTTT
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGTGTGGTTT
TTTGCGGTTT
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGTGTGGTTT---
--TGTGGATTNNN
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CGTGTGGTTT
---GTGGAT-
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGTGTGGTTT--
NNTGTGGATTSS
 A T G C C A T G A G C T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G