Information for 6-CATCGCGCCKCTGCCT (Motif 5)

A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
Reverse Opposite:
C T G A C T A G A T C G T G A C C G T A A C T G G T A C C T A G A T C G A T G C A C T G A G T C C T A G C T G A C G A T A C T G
p-value:1e-13
log p-value:-3.145e+01
Information Content per bp:1.773
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.2 +/- 24.5bp
Average Position of motif in Background71.5 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CATCGCGCCKCTGCCT
-----CGCAGCTGCG-
 A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CATCGCGCCKCTGCCT-
---GGGGCCGAGGCCTG
 A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CATCGCGCCKCTGCCT
-AGCGCGCC-------
 A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CATCGCGCCKCTGCCT
---------GCTTCC-
 A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CATCGCGCCKCTGCCT
NNGCNCTGCGCGGC-----
 A C G T A C G T A C G T A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CATCGCGCCKCTGCCT
TACGCCCCGCCACTCTG-
 A C G T A C G T A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CATCGCGCCKCTGCCT
-GCCCCGCCCCCTCCC
 A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CATCGCGCCKCTGCCT
TCACCCCGCCCCAAATT
 A C G T A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CATCGCGCCKCTGCCT
NNTTCCCGCCC------
 A C G T A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CATCGCGCCKCTGCCT
----NNGCAGCTGTC-
 A G T C G C T A A G C T A G T C C T A G A G T C A T C G A T G C A G T C A C T G A G T C A C G T A C T G A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T