Information for 24-CTGGGTTACAGGGGCT (Motif 42)

A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A T G C A G T C A T G C A C G T A C T G A C G T C T G A G T C A A G T C A G T C A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.422e+01
Information Content per bp:1.907
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.2 +/- 18.5bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGGTTACAGGGGCT
GTAGGTCACTGGGTCA
 A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGGGTTACAGGGGCT
TACCCTAGTTACCGA----
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGGGTTACAGGGGCT
-AGGGTAACAGC----
 A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGGGTTACAGGGGCT
-TGAGTGACAGSC---
 A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CTGGGTTACAGGGGCT
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTGGGTTACAGGGGCT--
--GGGTTACTANAGGTCA
 A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGGGTTACAGGGGCT
NTGATTGACAGN----
 A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CTGGGTTACAGGGGCT
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:9
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGTTACAGGGGCT
NVCAKCTGGNNNCCAGMTGB-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:CTGGGTTACAGGGGCT
------NNCAGGTGTN
 A G T C A C G T A C T G A C T G A C T G A C G T A G C T C G T A A G T C C G T A A T C G C T A G A T C G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T