Information for 10-YGTTGACCMC (Motif 36)

A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C
Reverse Opposite:
A C T G A C T G C T A G C T A G G A C T G T A C C T G A C T G A T A G C C T A G
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.667
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 26.3bp
Average Position of motif in Background40.5 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--YGTTGACCMC-----
NNANTTGACCCCTNNNN
 A C G T A C G T A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--YGTTGACCMC-----
TGTCGTGACCCCTTAAT
 A C G T A C G T A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--YGTTGACCMC-----
NNNNTTGACCCCTNNNN
 A C G T A C G T A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:YGTTGACCMC-
---TGACCYCT
 A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YGTTGACCMC-----
NNCNTGACCCCGCTCT
 A C G T A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:YGTTGACCMC
---TGACCT-
 A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YGTTGACCMC------
TATCGACCCCCCACAG
 A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-YGTTGACCMC-----
NNNNTGACCCGGCGCG
 A C G T A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-YGTTGACCMC--
CNNTTGACCTTTG
 A C G T A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---YGTTGACCMC
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C A T C G A G C T A G C T A C T G C T G A A G T C A G T C G T A C G T A C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T