Information for 18-ATTATTCATCATTCAC (Motif 26)

C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G G T C A G T C A A C G T A C T G C T G A A C G T A C T G C G T A G C T A A C G T G T C A C G T A G A C T
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.902
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.8 +/- 11.3bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTATTCATCATTCAC
GAATATTCAT-------
 A C G T C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ATTATTCATCATTCAC
---ATGCATAATTCA-
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
A C G T A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTATTCATCATTCAC
NTTATTCGTCATNC--
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATTATTCATCATTCAC--
---TATCATAATTAAGGA
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:ATTATTCATCATTCAC
-----TCATCAATCA-
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATTATTCATCATTCAC
---GTTAATNATTAAC
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
A C G T A C G T A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C

POU4F3/MA0791.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATTATTCATCATTCAC
CTCATTAATTATGCAT
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATTATTCATCATTCAC
NNATGASTCATH------
 A C G T A C G T C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTATTCATCATTCAC
CTCATTAATTATGCAT
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

HNF1A/MA0046.2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATTATTCATCATTCAC-
--AGTTAATGATTAACT
 C T G A C G A T A C G T C G T A C G A T A C G T A G T C C G T A A G C T G T A C C G T A A C G T C A G T A G T C C G T A A G T C A C G T
A C G T A C G T C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T