Information for 13-CATTGCGTGTATG (Motif 22)

A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
Reverse Opposite:
A G T C C G T A C G A T C G T A A G T C G T C A G A T C C T A G A G T C C G T A G T C A A C G T A C T G
p-value:1e-10
log p-value:-2.400e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.6 +/- 27.0bp
Average Position of motif in Background56.9 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATTGCGTGTATG
--TTGCGTGCVA-
 A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTGCGTGTATG-----
-NTTNTATGAATGTGNNC
 A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATTGCGTGTATG-----
--NNGCGTGTGTGCNGCN
 A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATTGCGTGTATG
---TGCGTG----
 A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CATTGCGTGTATG
NNNCCATTGTGTNAN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATTGCGTGTATG-
CCATTGTATGCAAAT
 A C G T A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATTGCGTGTATG
CCATTGTTYB----
 A C G T A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CATTGCGTGTATG
CAATGCATTGTGGGTA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATTGCGTGTATG
CTCATTGTC------
 A C G T A C G T A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CATTGCGTGTATG
CCWTTGTYYB----
 A C G T A G T C C G T A A C G T A C G T C T A G A G T C C A T G A C G T A C T G C G A T G C T A C G A T A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T