Information for 4-GARGAMWTTGGCTTAT (Motif 7)

T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
Reverse Opposite:
C T G A C A G T T C G A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C A G T A G C T A G T C G A T C G C A T A G T C
p-value:1e-14
log p-value:-3.322e+01
Information Content per bp:1.698
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif21.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.5 +/- 23.1bp
Average Position of motif in Background48.7 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:GARGAMWTTGGCTTAT
-------TTGACTTTT
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GARGAMWTTGGCTTAT
-------TTGGCA---
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GARGAMWTTGGCTTAT
------NTTGGCANN-
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:GARGAMWTTGGCTTAT
---------NGCTN--
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GARGAMWTTGGCTTAT
-----NNTTGGCANN-
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GARGAMWTTGGCTTAT
--------NGGATTAN
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GARGAMWTTGGCTTAT
----ACTTTCGTTTCT
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GARGAMWTTGGCTTAT
----ACTTTCACTTTC
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GARGAMWTTGGCTTAT
NNTGTTTATTTTGGCA---
 A C G T A C G T A C G T T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GARGAMWTTGGCTTAT
CAGGTAATTACCTCAG
 T A C G C G T A C T A G C T A G T C G A G T C A C G A T C G A T G A C T T A C G C T A G A G T C A C G T A G C T G T C A A G C T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G