Information for 17-ACGCAAAACGTGAGAC (Motif 42)

C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T
p-value:1e-3
log p-value:-8.934e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 20.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACGCAAAACGTGAGAC
ATGCAACAGGTGG---
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACGCAAAACGTGAGAC--
NANTGGAAAAANTGAGTCAN
 A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACGCAAAACGTGAGAC
-----RTACGTGC---
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACGCAAAACGTGAGAC
GAGCAACAGGTGGTT-
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ACGCAAAACGTGAGAC
----GWAAYHTGABMC
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACGCAAAACGTGAGAC
------CACGTG----
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:ACGCAAAACGTGAGAC-
-------AGGTGTGAAM
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ACGCAAAACGTGAGAC
-----NCACGTGACN-
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----ACGCAAAACGTGAGAC
TBGCACGCAA----------
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ACGCAAAACGTGAGAC
----NVCACGTG----
 C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T