Information for 11-TGCGGTCAAT (Motif 37)

A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A G T C A G T C A C T G A G T C C G T A
p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 17.6bp
Average Position of motif in Background34.3 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TGCGGTCAAT---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGTCAAT
TTGCGGTTT--
 A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGTCAAT
TTTGCGGTTT--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGCGGTCAAT---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGCGGTCAAT---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGCGGTCAAT--
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGCGGTCAAT
-GCTGTCAA-
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCGGTCAAT
AGRGGTCA--
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGCGGTCAAT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCGGTCAAT
TRAGGTCA--
 A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A C G T A A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T