Information for 16-CCTAAGGACACAAGAA (Motif 35)

A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G T C C G A T A C G T A C T G A C G T A C T G A G C T A G T C A G T C A C G T A C G T C T G A A C T G A C T G
p-value:1e-7
log p-value:-1.690e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.8 +/- 21.4bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTAAGGACACAAGAA
---AAGGTCAC-----
 A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTAAGGACACAAGAA-
-CGAAGCACACAAAATA
 A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTAAGGACACAAGAA
GCCTCAGGGCAT-----
 A C G T A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTAAGGACACAAGAA
--CAAGGHCANV----
 A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTAAGGACACAAGAA
TCACCTCTGGGCAG-----
 A C G T A C G T A C G T A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTAAGGACACAAGAA
-CAAAGGTCAG-----
 A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTAAGGACACAAGAA
SCCTSAGGSCAW-----
 A C G T A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTAAGGACACAAGAA
-CAAAGGTCAAGGG--
 A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTAAGGACACAAGAA
--TRAGGTCA------
 A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTAAGGACACAAGAA
NTCAAGGTCA------
 A G T C G T A C A G C T C G T A C G T A A C T G A C T G C T G A G T A C G T C A A G T C C G T A C G T A A C T G C G T A C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T