Information for 13-WTCARAGAGTGASKGA (Motif 30)

C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C G T C A A T C G A C G T A G T C G T C A A G T C A C G T A G T C A C G T A G C T A G C T A C T G C G T A C G T A
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.7 +/- 22.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN(var.2)/MA0489.1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WTCARAGAGTGASKGA-
---AGGAGATGACTCAT
 C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A A C G T
A C G T A C G T A C G T C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WTCARAGAGTGASKGA
ACATCAAAGG--------
 A C G T A C G T C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----WTCARAGAGTGASKGA
AAAGATCAAAGGAA------
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WTCARAGAGTGASKGA
ACATCAAAGGNA------
 A C G T A C G T C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----WTCARAGAGTGASKGA
TATAGATCAAAGGAAAA----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----WTCARAGAGTGASKGA
NNNAGATCAAAGGANNN----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----WTCARAGAGTGASKGA
NANAGATCAAAGGGNNN----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:WTCARAGAGTGASKGA--
-------GGTGACTCATG
 C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:WTCARAGAGTGASKGA
------NCGTGACN--
 C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:WTCARAGAGTGASKGA-
------GGATGACTCAT
 C G A T A C G T A G T C C T G A T C A G C G T A A C T G C G T A A C T G A C G T A C T G C G T A A T G C A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T