Information for 16-TCACAACGGCAGT (Motif 16)

A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
Reverse Opposite:
C T G A A G T C C A G T A C T G T A G C A G T C A C T G A C G T A G C T A C T G A C G T A T C G G T C A
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.737
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif43.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.5 +/- 26.0bp
Average Position of motif in Background43.7 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCACAACGGCAGT
-AACAAAGG----
 A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCACAACGGCAGT
-RACAAWGG----
 A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCACAACGGCAGT
VRRACAAWGG----
 A C G T A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCACAACGGCAGT
RNAACAATGG----
 A C G T A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCACAACGGCAGT
ATGTCACAACAACAC-
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCACAACGGCAGT
--ACAAAG-----
 A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCACAACGGCAGT
CTCACACAATGGCGC-
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCACAACGGCAGT
GAACAATGGN---
 A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCACAACGGCAGT
AAAACAAAGG----
 A C G T A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCACAACGGCAGT---
--NCAACAGCTGTTGC
 A C G T A T G C C G T A A G T C C T G A C G T A T A G C C T A G A C T G T G A C G T C A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C