Information for 3-CGCGCSGCTCCCTGRG (Motif 5)

G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
Reverse Opposite:
T A G C G A T C T A G C T C G A A T C G A T C G T C A G C T G A A T C G A T G C A T C G A C T G T A G C A T C G G T A C C T A G
p-value:1e-20
log p-value:-4.701e+01
Information Content per bp:1.706
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.0 +/- 22.2bp
Average Position of motif in Background43.0 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCGCSGCTCCCTGRG
GGCCCCGCCCCC----
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCGCSGCTCCCTGRG
-GCTCCGCCCMCY---
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CGCGCSGCTCCCTGRG
------GCTCCG----
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGCGCSGCTCCCTGRG
---GCCCCGCCCC---
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCGCSGCTCCCTGRG
-GCCCCGCCCCC----
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCGCSGCTCCCTGRG
GCCGCGCAGTGCGT----
 A C G T A C G T G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCGCSGCTCCCTGRG
-GCCCCGCCCCCTCCC
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGCGCSGCTCCCTGRG
---GCCCCACCCA---
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCGCSGCTCCCTGRG
AGCGCGCC----------
 A C G T A C G T G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGCGCSGCTCCCTGRG
---GCCMCRCCCH---
 G A T C C A T G A T G C A C T G G T A C T A G C A T C G A T G C A G C T A G T C A T G C T A G C A G C T A T C G C T A G A T C G
A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T