Information for 20-GTCAGTTATT (Motif 35)

A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T
Reverse Opposite:
C G T A C G T A C A G T T G C A G T C A A G T C A G C T A C T G T G C A G T A C
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.764
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets51.8 +/- 26.8bp
Average Position of motif in Background40.8 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGTTATT-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTCAGTTATT--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTCAGTTATT
TTAAGTGCTT
 A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCAGTTATT-
-GCAGTGATTT
 A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCAGTTATT
GGCVGTTR--
 A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCAGTTATT--
--CNGTGATTTN
 A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGTTATT
TGGCAGTTGN-
 A C G T A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCAGTTATT-
TGCTGTGATTT
 A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGTTATT--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGTTATT
BRRCVGTTDN-
 A C G T A C T G A C G T G T A C C T G A A C T G A C G T A C G T G T C A C G A T A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T