Information for 12-CTTTGGACAA (Motif 22)

A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C T A G A C G T A G T C G T A C C T G A C T G A C G T A A C T G
p-value:1e-11
log p-value:-2.724e+01
Information Content per bp:1.890
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.8 +/- 30.7bp
Average Position of motif in Background57.6 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTTTGGACAA
---TTGACAG
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTTTGGACAA----
-----GACAATGNN
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTTGGACAA
--RHTGWCAR
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTTTGGACAA-
---TTGACAGG
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTTGGACAA---
---RNAACAATGG
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTTTGGACAA
---TGGAAAA
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTTGGACAA---
---VRRACAAWGG
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTTTGGACAA--
------ACAAAG
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTTTGGACAA---
-----RACAAWGG
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTTGGACAA------
-CTCACACAATGGCGC
 A G T C A C G T A G C T A G C T A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C