Information for 1-CCACAAGAGGGCG (Motif 1)

A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G
Reverse Opposite:
A G T C A C T G A T G C G A T C T A G C G A C T A T G C G A C T C A G T A C T G A G C T C A T G C T A G
p-value:1e-38
log p-value:-8.893e+01
Information Content per bp:1.764
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.4 +/- 21.7bp
Average Position of motif in Background22.6 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAGAGGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGAGGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGAGGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCACAAGAGGGCG-----
-NNNAAGGGGGCGGGNNN
 A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCACAAGAGGGCG--
---CAAGATGGCGGC
 A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCACAAGAGGGCG--
---CAAGATGGCGGC
 A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCACAAGAGGGCG-----
----AAGGGGGCGTGGCC
 A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCACAAGAGGGCG----
-----RGKGGGCGKGGC
 A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

KLF13/MA0657.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCACAAGAGGGCG------
-CAAAAAGGGGCGTGGCAT
 A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCACAAGAGGGCG----
-----RGKGGGCGGAGC
 A G T C G A T C T C G A G T A C G T C A C T G A A T C G C T G A A C T G C A T G A T C G T G A C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C