Information for 1-GCGCTCTGGCCCGGGC (Motif 5)

A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
Reverse Opposite:
A C T G A T G C A T G C A G T C C T A G A C T G A T C G G A T C A G T C G T C A T A C G T G C A A C T G A G T C A C T G A G T C
p-value:1e-9
log p-value:-2.270e+01
Information Content per bp:1.846
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif26.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.5 +/- 19.5bp
Average Position of motif in Background45.4 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCGCTCTGGCCCGGGC--
----ACATGCCCGGGCAT
 A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTGGCCCGGGC
TGACCTCTGACCCCN--
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTGGCCCGGGC
TGACCTTTGCCCTAN--
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCGCTCTGGCCCGGGC
--GCTCGGSCTC----
 A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCGCTCTGGCCCGGGC--
--NNNNTGACCCGGCGCG
 A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCGCTCTGGCCCGGGC---
-----CAGGCCNNGGCCNN
 A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTGGCCCGGGC
TGACCTTTGCCCTA---
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTGGCCCGGGC
TGGACTTTGNNCTNTG-
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCTGGCCCGGGC
TGGACTTTGNNCTCN--
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCGCTCTGGCCCGGGC
TGACCTTTGCCCCA---
 A C G T A C T G A G T C A C T G A G T C A C G T A G T C C A G T A C T G C A T G A T G C A G T C A G T C A C T G A T C G A T C G A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T