p-value: | 1e-11 |
log p-value: | -2.564e+01 |
Information Content per bp: | 1.674 |
Number of Target Sequences with motif | 31.0 |
Percentage of Target Sequences with motif | 3.43% |
Number of Background Sequences with motif | 351.9 |
Percentage of Background Sequences with motif | 0.75% |
Average Position of motif in Targets | 51.1 +/- 26.1bp |
Average Position of motif in Background | 51.6 +/- 33.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCGCTATGGC-- NGTTGCCATGGCAA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCGCTATGGC- NNCGTTGCTATGGNN |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCGCTATGGC--- GTTGCCATGGNAAC |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCGCTATGGC--- KGTTGCCATGGCAAC |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCGCTATGGC--- CGGTTGCCATGGCAAC |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCGCTATGGC---- TTGCCATGGCAACC |
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RFX4/MA0799.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCGCTATGGC---- CGTTGCCATGGCAACG |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -8 |
Orientation: | reverse strand |
Alignment: | --------TCGCTATGGC----- NTNNNNNGTTGCTANGGNNCANA |
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RFX3/MA0798.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCGCTATGGC---- CGTTGCCATGGCAACN |
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RFX2/MA0600.2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCGCTATGGC---- CGTTGCCATGGCAACG |
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