Information for 3-TKCTGGGAATTGTAGT (Motif 3)

A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
Reverse Opposite:
T C G A G T A C G A C T G T C A A G T C C T G A G T C A A C G T A G C T A T G C A G T C A G T C C T G A A C T G T G C A C T G A
p-value:1e-14
log p-value:-3.353e+01
Information Content per bp:1.755
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif88.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets45.0 +/- 22.4bp
Average Position of motif in Background43.6 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---TKCTGGGAATTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---TKCTGGGAATTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.88
Offset:4
Orientation:reverse strand
Alignment:TKCTGGGAATTGTAGT
----GGGAATTGTAGT
 A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TKCTGGGAATTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TKCTGGGAATTGTAGT
CTTCTGGGAAA------
 A C G T A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TKCTGGGAATTGTAGT
TTCTTGGAAAN-----
 A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TKCTGGGAATTGTAGT
-CSTGGGAAAD-----
 A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TKCTGGGAATTGTAGT
TTTCCAGGAAA------
 A C G T A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TKCTGGGAATTGTAGT
TTTCCAGGAAATGG---
 A C G T A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TKCTGGGAATTGTAGT
WDNCTGGGCA-------
 A C G T A G C T A C G T T G A C A G C T A C T G A C T G A T C G C T G A T G C A C A G T A G C T A C T G A C G T C T G A A C T G A G C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T