Information for 10-GCAGTGCGCCGGA (Motif 12)

A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A
Reverse Opposite:
A G C T A T G C T G A C A C T G A T C G A G T C A C T G G T A C C G T A A G T C A C G T A C T G A G T C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.810
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif33.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets41.9 +/- 24.8bp
Average Position of motif in Background51.7 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCAGTGCGCCGGA
--AGCGCGCC---
 A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGCGCCGGA
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAGTGCGCCGGA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTGCGCCGGA
NNGCNCTGCGCGGC-
 A C G T A C G T A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTGCGCCGGA
NGAAGC--------
 A C G T A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCAGTGCGCCGGA----
--GGNGCGNCTGTTNNN
 A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGTGCGCCGGA--
NTCGCGCGCCTTNNN
 A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTGCGCCGGA
TGGCAGNCTGCCAG-
 A C G T A C G T A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCAGTGCGCCGGA--
ANCGCGCGCCCTTNN
 A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCAGTGCGCCGGA---
AGCTCGGCGCCAAAAGC
 A C G T A C T G G T A C C G T A A C T G A C G T A C T G A G T C A C T G A T G C A G T C A C T G A T C G T C G A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C