Information for 16-CTCTCCACAA (Motif 16)

A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G C G T A A C T G
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.958
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.4 +/- 20.4bp
Average Position of motif in Background50.5 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CTCTCCACAA
--ATCCAC--
 A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTCTCCACAA--
NWAACCACADNN
 A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCTCCACAA
TCCAATCCACA-
 A C G T A C G T A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCACAA-
SSAATCCACANN
 A C G T A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCTCCACAA
NAAACCACAG
 A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCTCCACAA-
-AAACCACAGC
 A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCTCCACAA--
-AAACCACAGAN
 A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCTCCACAA-
-AAACCACANN
 A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCCACAA
NSCACTYVAV--
 A C G T A C G T A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCACAA-
SCTGTCARCACC
 A C G T A G T C A C G T G T A C A C G T A G T C A G T C C G T A A G T C C G T A C G T A A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C