Information for 4-GGCGCCGGKGCCCGGA (Motif 6)

A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
Reverse Opposite:
A C G T A T G C G T A C C T A G A C T G A C T G A T G C G T C A A G T C A G T C A T C G A C T G T G A C C A T G A T G C A G T C
p-value:1e-16
log p-value:-3.803e+01
Information Content per bp:1.783
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 24.4bp
Average Position of motif in Background69.2 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCGCCGGKGCCCGGA
GGGGCCGAGGCCTG--
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGCGCCGGKGCCCGGA
-------CTGCCCGCA
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCGCCGGKGCCCGGA
GGGGGCGGGGCC----
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCGCCGGKGCCCGGA-
-TTGGGGGCGCCCCTAG
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGCGCCGGKGCCCGGA
-SDGCAGGTGCNS---
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGCGCCGGKGCCCGGA
-GGGCGGGACC-----
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCCGGKGCCCGGA
NNNNTTGGCGCCGANNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCGCCGGKGCCCGGA
TGCGCAGGCGC-----
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GGCGCCGGKGCCCGGA
-------ATGCCCACC
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGCGCCGGKGCCCGGA
-----CGGAGC-----
 A C T G A T C G G A T C A C T G A G T C A T G C A C T G T A C G C A G T A T C G A G T C A G T C A G T C A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T