Information for 4-GCCACCAGGTGGC (Motif 5)

T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C
Reverse Opposite:
C T A G T G A C A G T C G T C A A G T C G T A C A C G T A C T G A T C G A C G T A C T G A T C G A G T C
p-value:1e-17
log p-value:-4.010e+01
Information Content per bp:1.766
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif33.6
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.4 +/- 21.5bp
Average Position of motif in Background47.4 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCAGGTGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--GCCACCAGGTGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GCCACCAGGTGGC-------
GCCASCAGGGGGCGCYVNNG
 T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCACCAGGTGGC
---NNCAGGTGNN
 T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCACCAGGTGGC
---AACAGATGGC
 T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCACCAGGTGGC
---AACAGGTGNT
 T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCAGGTGGC-
DCHCAGCAGGRGGCC
 A C G T T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCCACCAGGTGGC-
--SDGCAGGTGCNS
 T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCACCAGGTGGC-
GAGCAACAGGTGGTT
 A C G T T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCCACCAGGTGGC
---NNCAGGTGTN
 T A C G A T G C G T A C T G C A T A G C A G T C T C G A C A T G C T A G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T