Information for 18-CGCCTACAGG (Motif 32)

A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G A C G T C G T A A C T G A C T G A T G C A C T G
p-value:1e-8
log p-value:-1.897e+01
Information Content per bp:1.903
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets64.0 +/- 32.5bp
Average Position of motif in Background49.3 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:-9
Orientation:forward strand
Alignment:---------CGCCTACAGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTACAGG
TTCCCCCTAC---
 A C G T A C G T A C G T A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CGCCTACAGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGCCTACAGG--
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCCTACAGG--
TGCCCCCGGGCA
 A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTACAGG
YCCGCCCACGCN
 A C G T A C G T A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTACAGG---
NTGCCCANNGGTNA
 A C G T A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGCCTACAGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGCCTACAGG--
TGCCCCAGGGCA
 A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCCTACAGG--
TGCCCTNGGGCA
 A G T C A T C G A G T C A G T C A C G T C G T A A T G C G T C A A C T G A C T G A C G T A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A