Information for 2-TGGCGGGAAA (Motif 3)

A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A
Reverse Opposite:
G A C T A G C T A G C T A G T C A G T C A G T C C A T G A G T C A G T C T G C A
p-value:1e-21
log p-value:-4.951e+01
Information Content per bp:1.843
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif7.56%
Number of Background Sequences with motif245.2
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets53.1 +/- 22.7bp
Average Position of motif in Background51.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGGCGGGAAA--
TGGCGGGAAAHB
 A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A A C G T A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-TGGCGGGAAA
CWGGCGGGAA-
 A C G T A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--TGGCGGGAAA
BTKGGCGGGAAA
 A C G T A C G T A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGGGAAA
TTTGGCGGGAAA
 A C G T A C G T A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TGGCGGGAAA-
-GGCGGGAARN
 A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TGGCGGGAAA-
GGGCGGGAAGG
 A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---TGGCGGGAAA-
TTTTGGCGGGAAAA
 A C G T A C G T A C G T A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TGGCGGGAAA-
-GGCGGGAAAH
 A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TGGCGGGAAA-
GGGCGGGAAGG
 A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-TGGCGGGAAA-
TTCGCGCGAAAA
 A C G T A C G T C T A G A C T G G T A C C T A G A C T G A C T G C T G A C T G A C T G A A C G T
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A