Information for 16-AGCCAGAGAMTGG (Motif 21)

C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
Reverse Opposite:
G T A C A T G C C G T A A C T G C G A T G T A C A C G T A T G C A C G T A T C G T C A G A T G C A C G T
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.746
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets64.1 +/- 24.3bp
Average Position of motif in Background56.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGAGAMTGG
GAGSCCGAGC----
 A C G T C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGAGAMTGG
ATGCCAGACN----
 A C G T C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGAGAMTGG
AAACCACAGAN---
 A C G T C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGAGAMTGG
CAGCC---------
 A C G T C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCCAGAGAMTGG----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGCCAGAGAMTGG-----
----GGAGAAAGGTGCGA
 C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGCCAGAGAMTGG
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAGAGAMTGG
BCAGACWA-------
 A C G T A C G T C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGCCAGAGAMTGG
AGCCTCAGGCA--
 C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGCCAGAGAMTGG
AGCCTCAGGCA--
 C G T A A T C G A G T C A T G C G T C A T A C G G T C A A C T G G C T A G T A C C G A T A T C G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T