Information for 12-TCAGGCGCGCTGC (Motif 17)

C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
Reverse Opposite:
A C T G A T G C C G T A A T C G A T G C A T C G A T G C A C T G A G T C A G T C A C G T A C T G G T C A
p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.837
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.4 +/- 26.2bp
Average Position of motif in Background41.4 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TCAGGCGCGCTGC
---GGCGCGCT--
 C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCGCGCTGC
GTCACGCTCNCTGA
 A C G T C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCAGGCGCGCTGC
SDGCAGGTGCNS---
 A C G T A C G T C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCAGGCGCGCTGC--
-CTGGCAGNCTGCCA
 C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C A C G T A C G T
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCAGGCGCGCTGC
-CAGGTGAGG---
 C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGCGCGCTGC
NNCAGGTGNN----
 A C G T C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCAGGCGCGCTGC
AGCAACAGCCGCACC--
 A C G T A C G T A C G T A C G T C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCAGGCGCGCTGC
TGCGCAGGCGC-----
 A C G T A C G T A C G T C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCAGGCGCGCTGC
ATAAAGGCGCGCGAT
 A C G T A C G T C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGCGCGCTGC
NNCAGGTGCG----
 A C G T C A G T A G T C C G T A A C T G A C T G G T A C A T C G A T G C A T C G A T G C A C G T A T C G G T A C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T