Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-67 | -1.555e+02 | 0.0000 | 201.0 | 23.21% | 2517.6 | 5.47% | motif file (matrix) |
svg |
2 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-61 | -1.414e+02 | 0.0000 | 259.0 | 29.91% | 4456.9 | 9.69% | motif file (matrix) |
svg |
3 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-61 | -1.413e+02 | 0.0000 | 170.0 | 19.63% | 1957.1 | 4.25% | motif file (matrix) |
svg |
4 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-58 | -1.336e+02 | 0.0000 | 238.0 | 27.48% | 3974.2 | 8.64% | motif file (matrix) |
svg |
5 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-55 | -1.275e+02 | 0.0000 | 148.0 | 17.09% | 1628.2 | 3.54% | motif file (matrix) |
svg |
6 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-48 | -1.113e+02 | 0.0000 | 137.0 | 15.82% | 1594.1 | 3.47% | motif file (matrix) |
svg |
7 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-42 | -9.746e+01 | 0.0000 | 160.0 | 18.48% | 2431.6 | 5.29% | motif file (matrix) |
svg |
8 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-42 | -9.692e+01 | 0.0000 | 139.0 | 16.05% | 1870.8 | 4.07% | motif file (matrix) |
svg |
9 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-40 | -9.435e+01 | 0.0000 | 178.0 | 20.55% | 3027.0 | 6.58% | motif file (matrix) |
svg |
10 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-30 | -7.080e+01 | 0.0000 | 77.0 | 8.89% | 776.0 | 1.69% | motif file (matrix) |
svg |
11 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-28 | -6.606e+01 | 0.0000 | 146.0 | 16.86% | 2742.3 | 5.96% | motif file (matrix) |
svg |
12 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-27 | -6.324e+01 | 0.0000 | 93.0 | 10.74% | 1266.9 | 2.75% | motif file (matrix) |
svg |
13 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-25 | -5.811e+01 | 0.0000 | 115.0 | 13.28% | 1989.4 | 4.32% | motif file (matrix) |
svg |
14 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-22 | -5.191e+01 | 0.0000 | 148.0 | 17.09% | 3241.6 | 7.05% | motif file (matrix) |
svg |
15 |
| E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer | 1e-20 | -4.769e+01 | 0.0000 | 87.0 | 10.05% | 1413.6 | 3.07% | motif file (matrix) |
svg |
16 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-17 | -4.029e+01 | 0.0000 | 37.0 | 4.27% | 310.4 | 0.67% | motif file (matrix) |
svg |
17 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-17 | -4.005e+01 | 0.0000 | 52.0 | 6.00% | 634.1 | 1.38% | motif file (matrix) |
svg |
18 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-17 | -3.996e+01 | 0.0000 | 58.0 | 6.70% | 783.3 | 1.70% | motif file (matrix) |
svg |
19 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-17 | -3.949e+01 | 0.0000 | 46.0 | 5.31% | 504.2 | 1.10% | motif file (matrix) |
svg |
20 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-16 | -3.809e+01 | 0.0000 | 59.0 | 6.81% | 843.6 | 1.83% | motif file (matrix) |
svg |
21 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.782e+01 | 0.0000 | 117.0 | 13.51% | 2664.3 | 5.79% | motif file (matrix) |
svg |
22 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-16 | -3.727e+01 | 0.0000 | 48.0 | 5.54% | 582.6 | 1.27% | motif file (matrix) |
svg |
23 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-15 | -3.635e+01 | 0.0000 | 39.0 | 4.50% | 393.7 | 0.86% | motif file (matrix) |
svg |
24 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-14 | -3.379e+01 | 0.0000 | 44.0 | 5.08% | 541.2 | 1.18% | motif file (matrix) |
svg |
25 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-14 | -3.269e+01 | 0.0000 | 47.0 | 5.43% | 633.0 | 1.38% | motif file (matrix) |
svg |
26 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-13 | -3.183e+01 | 0.0000 | 46.0 | 5.31% | 623.6 | 1.36% | motif file (matrix) |
svg |
27 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-13 | -3.121e+01 | 0.0000 | 31.0 | 3.58% | 289.3 | 0.63% | motif file (matrix) |
svg |
28 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.746e+01 | 0.0000 | 247.0 | 28.52% | 8584.7 | 18.66% | motif file (matrix) |
svg |
29 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-9 | -2.099e+01 | 0.0000 | 40.0 | 4.62% | 685.8 | 1.49% | motif file (matrix) |
svg |
30 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-8 | -1.965e+01 | 0.0000 | 133.0 | 15.36% | 4198.1 | 9.13% | motif file (matrix) |
svg |
31 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-8 | -1.934e+01 | 0.0000 | 193.0 | 22.29% | 6833.9 | 14.86% | motif file (matrix) |
svg |
32 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-8 | -1.893e+01 | 0.0000 | 30.0 | 3.46% | 451.2 | 0.98% | motif file (matrix) |
svg |
33 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-8 | -1.857e+01 | 0.0000 | 35.0 | 4.04% | 599.9 | 1.30% | motif file (matrix) |
svg |
34 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.819e+01 | 0.0000 | 47.0 | 5.43% | 982.9 | 2.14% | motif file (matrix) |
svg |
35 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-7 | -1.727e+01 | 0.0000 | 21.0 | 2.42% | 253.0 | 0.55% | motif file (matrix) |
svg |
36 |
| E-box(bHLH)/Promoter/Homer | 1e-7 | -1.726e+01 | 0.0000 | 26.0 | 3.00% | 378.2 | 0.82% | motif file (matrix) |
svg |
37 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-7 | -1.666e+01 | 0.0000 | 27.0 | 3.12% | 417.9 | 0.91% | motif file (matrix) |
svg |
38 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-6 | -1.527e+01 | 0.0000 | 54.0 | 6.24% | 1334.5 | 2.90% | motif file (matrix) |
svg |
39 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -9.156e+00 | 0.0010 | 99.0 | 11.43% | 3589.1 | 7.80% | motif file (matrix) |
svg |
40 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -9.052e+00 | 0.0011 | 125.0 | 14.43% | 4776.7 | 10.38% | motif file (matrix) |
svg |
41 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.472e+00 | 0.0019 | 7.0 | 0.81% | 62.3 | 0.14% | motif file (matrix) |
svg |
42 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-3 | -8.200e+00 | 0.0024 | 15.0 | 1.73% | 272.3 | 0.59% | motif file (matrix) |
svg |
43 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -7.476e+00 | 0.0048 | 15.0 | 1.73% | 292.9 | 0.64% | motif file (matrix) |
svg |
44 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -7.244e+00 | 0.0059 | 18.0 | 2.08% | 397.6 | 0.86% | motif file (matrix) |
svg |
45 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-3 | -6.941e+00 | 0.0078 | 52.0 | 6.00% | 1744.6 | 3.79% | motif file (matrix) |
svg |
46 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.720e+00 | 0.0095 | 4.0 | 0.46% | 24.7 | 0.05% | motif file (matrix) |
svg |
47 |
| E2F(E2F)/Hela-CellCycle-Expression/Homer | 1e-2 | -6.664e+00 | 0.0099 | 12.0 | 1.39% | 222.3 | 0.48% | motif file (matrix) |
svg |
48 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.622e+00 | 0.0101 | 5.0 | 0.58% | 42.6 | 0.09% | motif file (matrix) |
svg |
49 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -6.243e+00 | 0.0144 | 44.0 | 5.08% | 1462.0 | 3.18% | motif file (matrix) |
svg |
50 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -6.199e+00 | 0.0148 | 20.0 | 2.31% | 509.6 | 1.11% | motif file (matrix) |
svg |
51 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -6.162e+00 | 0.0150 | 4.0 | 0.46% | 28.9 | 0.06% | motif file (matrix) |
svg |
52 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -6.136e+00 | 0.0151 | 5.0 | 0.58% | 47.5 | 0.10% | motif file (matrix) |
svg |
53 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.892e+00 | 0.0190 | 46.0 | 5.31% | 1576.3 | 3.43% | motif file (matrix) |
svg |
54 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -5.494e+00 | 0.0277 | 18.0 | 2.08% | 468.6 | 1.02% | motif file (matrix) |
svg |
55 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.477e+00 | 0.0277 | 61.0 | 7.04% | 2275.3 | 4.95% | motif file (matrix) |
svg |
56 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.422e+00 | 0.0287 | 13.0 | 1.50% | 293.6 | 0.64% | motif file (matrix) |
svg |
57 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -5.367e+00 | 0.0298 | 183.0 | 21.13% | 8114.8 | 17.64% | motif file (matrix) |
svg |
58 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.275e+00 | 0.0321 | 19.0 | 2.19% | 516.9 | 1.12% | motif file (matrix) |
svg |
59 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.274e+00 | 0.0321 | 20.0 | 2.31% | 554.4 | 1.21% | motif file (matrix) |
svg |
60 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.269e+00 | 0.0321 | 35.0 | 4.04% | 1160.6 | 2.52% | motif file (matrix) |
svg |
61 |
| MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.211e+00 | 0.0325 | 8.0 | 0.92% | 139.0 | 0.30% | motif file (matrix) |
svg |
62 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.205e+00 | 0.0325 | 54.0 | 6.24% | 1991.4 | 4.33% | motif file (matrix) |
svg |
63 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.142e+00 | 0.0338 | 111.0 | 12.82% | 4646.4 | 10.10% | motif file (matrix) |
svg |
64 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.061e+00 | 0.0361 | 18.0 | 2.08% | 490.0 | 1.07% | motif file (matrix) |
svg |
65 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -4.945e+00 | 0.0399 | 121.0 | 13.97% | 5159.9 | 11.22% | motif file (matrix) |
svg |
66 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -4.856e+00 | 0.0429 | 123.0 | 14.20% | 5271.8 | 11.46% | motif file (matrix) |
svg |
67 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.817e+00 | 0.0440 | 59.0 | 6.81% | 2259.7 | 4.91% | motif file (matrix) |
svg |
68 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.655e+00 | 0.0509 | 54.0 | 6.24% | 2051.3 | 4.46% | motif file (matrix) |
svg |
69 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -4.646e+00 | 0.0509 | 90.0 | 10.39% | 3724.2 | 8.10% | motif file (matrix) |
svg |
70 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.620e+00 | 0.0512 | 134.0 | 15.47% | 5849.9 | 12.72% | motif file (matrix) |
svg |