Information for 7-SCACAWKGCC (Motif 7)

A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G T G A C G T A C C G T A G A C T A T C G A G C T A C T G A T G C
p-value:1e-12
log p-value:-2.765e+01
Information Content per bp:1.729
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif597.4
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets46.7 +/- 26.3bp
Average Position of motif in Background46.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--SCACAWKGCC--
TGGCACCATGCCAA
 A C G T A C G T A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---SCACAWKGCC---
TTGGCANNNTGCCAAG
 A C G T A C G T A C G T A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:SCACAWKGCC-
---CTAGGCCT
 A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--SCACAWKGCC
AAGCACATGG--
 A C G T A C G T A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:SCACAWKGCC-
---CNAGGCCT
 A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--SCACAWKGCC--
TGGCAGNCTGCCAG
 A C G T A C G T A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C A C G T A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-SCACAWKGCC
AACAGATGGC-
 A C G T A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:SCACAWKGCC----
-----ATGCCCACC
 A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----SCACAWKGCC
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:SCACAWKGCC---
----CGTGCCAAG
 A T C G A G T C T C G A T A G C C T G A G C A T A C T G A C T G G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G