Information for 9-GAWGGSTCWGMGGRKG (Motif 18)

A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G
Reverse Opposite:
A T G C G T A C A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G T A A T C G A G T C A G T C C G A T A G C T A G T C
p-value:1e-5
log p-value:-1.373e+01
Information Content per bp:1.841
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.5 +/- 14.2bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAWGGSTCWGMGGRKG---
----NCNCAGCGGGGGGTC
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAWGGSTCWGMGGRKG---
----NCGCAGCGGGGGGTC
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAWGGSTCWGMGGRKG
CAAAGGTCAAGGG---
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAWGGSTCWGMGGRKG
-AGGGGTCAGAGGTCA
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAWGGSTCWGMGGRKG---
----DCHCAGCAGGRGGCC
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GAWGGSTCWGMGGRKG---
-----CACAGCGGGGGGTC
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAWGGSTCWGMGGRKG
----DCTCAGCAGG--
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GAWGGSTCWGMGGRKG
--GGGGCCCAAGGGGG
 A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GAWGGSTCWGMGGRKG
GGCGAGGGGTCAAGGGC--
 A C G T A C G T A C G T A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GAWGGSTCWGMGGRKG
AGGATGACTCAGCAC---
 A C G T A C G T A C T G C T G A C G T A A C T G A C T G T A G C A C G T A G T C C G A T A C T G G T C A C T A G A C T G C T A G A C T G A T C G
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T