Information for 9-TAGTTTAAAC (Motif 6)

A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C
Reverse Opposite:
A C T G A C G T A G C T A G C T C T G A G T C A C T G A T A G C C G A T T C G A
p-value:1e-11
log p-value:-2.727e+01
Information Content per bp:1.724
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif187.6
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets53.4 +/- 25.3bp
Average Position of motif in Background47.9 +/- 42.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TAGTTTAAAC
-NATTCAAAT
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGTTTAAAC
CGGTTTCAAA-
 A C G T A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAGTTTAAAC--
WWATRTAAACAN
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C A C G T A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAGTTTAAAC---
-WWTRTAAACAVG
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C A C G T A C G T A C G T
A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TAGTTTAAAC---
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGTTTAAAC-
-ACATCAAAGG
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAGTTTAAAC
---ATTAAA-
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAGTTTAAAC-
---DGTAAACA
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C A C G T
A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

FOXG1/MA0613.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TAGTTTAAAC--
----GTAAACAA
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAGTTTAAAC---
--AAGTAAACAAA
 A G C T G C T A A C T G A G C T A C G T A G C T C T G A C T G A T C G A G T A C A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A