Information for 5-CGCATGCGCA (Motif 4)

A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A
Reverse Opposite:
G A C T T C A G T G A C T C A G A T G C G C T A A G C T A C T G A T G C T A C G
p-value:1e-17
log p-value:-4.117e+01
Information Content per bp:1.683
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif12.46%
Number of Background Sequences with motif2334.8
Percentage of Background Sequences with motif5.18%
Average Position of motif in Targets50.5 +/- 24.7bp
Average Position of motif in Background48.7 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAC
 A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAG
 A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
GCGCCTGCGCA
 A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
GGCACGCGTC
 A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCATGCGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGCATGCGCA-
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA------
NNGTATGTGCACATNNN
 A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
SDGCAGGTGCNS
 A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
ACGCCCACGCA
 A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T A T G C T A C G T G A C T C G A C G A T A T C G A G T C A C T G A G T C C T G A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T